STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001050195_01230Unannotated protein. (52 aa)    
Predicted Functional Partners:
GCA_001050195_00670
Unannotated protein.
    
  0.992
DEQ80_10045
Unannotated protein.
    
  0.992
GCA_001050195_01434
Unannotated protein.
    
   0.958
acpP
Unannotated protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.956
GCA_001050195_00717
Unannotated protein.
  
 
 0.944
GCA_001050195_01386
Unannotated protein.
    
  0.841
GCA_001050195_01388
Unannotated protein.
    
  0.841
DEQ80_12360
Unannotated protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
    
  0.841
GCA_001050195_01387
Unannotated protein.
    
  0.828
GCA_001050195_01391
Unannotated protein.
    
  0.828
Your Current Organism:
Anaerolinea thermolimosa
NCBI taxonomy Id: 229919
Other names: A. thermolimosa, Anaerolinea thermolimosa Yamada et al. 2006, DSM 16554, JCM 12577, anaerobic filamentous bacterium IMO-1, strain IMO-1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.