STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DEQ80_09040Unannotated protein. (111 aa)    
Predicted Functional Partners:
flgG
Unannotated protein.
 
 
 0.909
flgF
Unannotated protein.
 
 
 0.907
DEQ80_09050
Unannotated protein.
 
     0.879
fliN
Unannotated protein.
 
  
 0.865
DEQ80_09085
Unannotated protein.
 
    0.859
flgC
Unannotated protein; Belongs to the flagella basal body rod proteins family.
 
     0.854
fliG
Unannotated protein.
 
    0.851
flhA
Unannotated protein; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
 
  
 0.842
fliF
Unannotated protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
     0.829
flgB
Unannotated protein.
 
   
 0.826
Your Current Organism:
Anaerolinea thermolimosa
NCBI taxonomy Id: 229919
Other names: A. thermolimosa, Anaerolinea thermolimosa Yamada et al. 2006, DSM 16554, JCM 12577, anaerobic filamentous bacterium IMO-1, strain IMO-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.