STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DEQ80_06195Unannotated protein. (308 aa)    
Predicted Functional Partners:
DEQ80_06215
Unannotated protein.
 
    0.957
fliN
Unannotated protein.
    
   0.940
DEQ80_06335
Unannotated protein.
 
 0.926
GCA_001050195_03675
Unannotated protein.
 
 0.926
DEQ80_01000
Unannotated protein.
 
 0.920
DEQ80_06745
Unannotated protein.
 
 
 0.916
DEQ80_02190
Unannotated protein.
 
 
 0.910
GCA_001050195_02385
Unannotated protein.
 
 
 0.909
DEQ80_06190
Unannotated protein.
    0.889
GCA_001050195_02379
Unannotated protein.
 
  
 0.880
Your Current Organism:
Anaerolinea thermolimosa
NCBI taxonomy Id: 229919
Other names: A. thermolimosa, Anaerolinea thermolimosa Yamada et al. 2006, DSM 16554, JCM 12577, anaerobic filamentous bacterium IMO-1, strain IMO-1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.