STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPL74790.1F420-dependent NADP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (224 aa)    
Predicted Functional Partners:
KPL74693.1
F420-0--gamma-glutamyl ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.960
KPL74691.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.933
KPL74009.1
Ribulose 5-phosphate epimerase; Catalyzes the formation of D-xylulose 5-phosphate from L-ribulose 5-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.903
KPL72786.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.903
KPL72405.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.897
KPL71008.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.897
KPL74690.1
F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.823
KPL74694.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.802
KPL74692.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.786
KPL73236.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.733
Your Current Organism:
Leptolinea tardivitalis
NCBI taxonomy Id: 229920
Other names: DSM 16556, JCM 12579, L. tardivitalis, Leptolinea tardivitalis Yamada et al. 2006, anaerobic filamentous bacterium YMTK-2, strain YMTK-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.