STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPL72490.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1072 aa)    
Predicted Functional Partners:
KPL70366.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.997
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.996
polA
Hypothetical protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
 0.996
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
  0.996
KPL73007.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.932
KPL70316.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.932
KPL73432.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.930
KPL71775.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.928
KPL70280.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.927
KPL75140.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.924
Your Current Organism:
Leptolinea tardivitalis
NCBI taxonomy Id: 229920
Other names: DSM 16556, JCM 12579, L. tardivitalis, Leptolinea tardivitalis Yamada et al. 2006, anaerobic filamentous bacterium YMTK-2, strain YMTK-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.