STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPL91752.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (393 aa)    
Predicted Functional Partners:
KPL81854.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.927
KPL81687.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.905
KPL90864.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.903
rplX
50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.
    
  0.903
rplW
Hypothetical protein; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.
    
  0.903
KPL91794.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.885
KPL89892.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.885
KPL89960.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.885
KPL87420.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.885
KPL81746.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.885
Your Current Organism:
Levilinea saccharolytica
NCBI taxonomy Id: 229921
Other names: DSM 16555, JCM 12578, L. saccharolytica, Levilinea saccharolytica Yamada et al. 2006, anaerobic filamentous bacterium KIBI-1, strain KIBI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.