STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPL91278.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (307 aa)    
Predicted Functional Partners:
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
 0.869
KPL88084.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.649
KPL85799.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.649
KPL77430.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.649
KPL83635.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.571
KPL83492.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.571
KPL91276.1
Hypothetical protein; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins.
  
    0.523
murC
Hypothetical protein; Cell wall formation; Belongs to the MurCDEF family.
     
 0.507
KPL91844.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.506
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
 0.502
Your Current Organism:
Levilinea saccharolytica
NCBI taxonomy Id: 229921
Other names: DSM 16555, JCM 12578, L. saccharolytica, Levilinea saccharolytica Yamada et al. 2006, anaerobic filamentous bacterium KIBI-1, strain KIBI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.