STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPL87467.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (479 aa)    
Predicted Functional Partners:
KPL87469.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.943
KPL87468.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 
0.937
KPL81758.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.809
KPL87522.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.803
KPL82239.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.784
KPL87470.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
KPL80921.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the uroporphyrinogen decarboxylase family.
  
  
  0.748
KPL90080.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the uroporphyrinogen decarboxylase family.
  
  
  0.735
KPL83548.1
4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.554
KPL83500.1
Sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.473
Your Current Organism:
Levilinea saccharolytica
NCBI taxonomy Id: 229921
Other names: DSM 16555, JCM 12578, L. saccharolytica, Levilinea saccharolytica Yamada et al. 2006, anaerobic filamentous bacterium KIBI-1, strain KIBI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.