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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OEG74209.1Dipeptidyl-peptidase 7; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides. (718 aa)    
Predicted Functional Partners:
OEG72414.1
Peptidase S9; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.657
OEG72541.1
Peptidase S9; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.533
OEG75784.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.531
OEG73116.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.514
OEG74938.1
Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.512
OEG72003.1
Putative selenate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.475
OEG72535.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.475
OEG73305.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.475
OEG75813.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.464
OEG73849.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
    0.461
Your Current Organism:
Shewanella colwelliana
NCBI taxonomy Id: 23
Other names: ATCC 39565, ATCC BAA-642 [[Shewanella affinis Ivanova et al. 2004]], Alteromonas colwelliana, CIP 107703 [[Shewanella affinis Ivanova et al. 2004]], KMM 3587 [[Shewanella affinis Ivanova et al. 2004]], S. colwelliana, Shewanella affinis, Shewanella affinis Ivanova et al. 2004, strain LST-W
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