Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OEG72053.1Peptidase M9; Derived by automated computational analysis using gene prediction method: Protein Homology. (986 aa)    
Predicted Functional Partners:
OEG75284.1
Peptidase S8; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.790
OEG74123.1
Peptidase S8; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family.
 
 
 0.616
OEG73634.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.591
OEG72670.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.538
OEG74200.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.501
OEG74314.1
Peptidase M6; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.500
OEG72848.1
beta-N-acetylhexosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.460
OEG72119.1
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.451
OEG73923.1
Ester cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.445
OEG72592.1
Alkaline phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.430
Your Current Organism:
Shewanella colwelliana
NCBI taxonomy Id: 23
Other names: ATCC 39565, ATCC BAA-642 [[Shewanella affinis Ivanova et al. 2004]], Alteromonas colwelliana, CIP 107703 [[Shewanella affinis Ivanova et al. 2004]], KMM 3587 [[Shewanella affinis Ivanova et al. 2004]], S. colwelliana, Shewanella affinis, Shewanella affinis Ivanova et al. 2004, strain LST-W
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