STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKH63735.1ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AAA ATPase family. (323 aa)    
Predicted Functional Partners:
AKH63736.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.900
AKH65360.1
Phosphonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.659
AKH65771.1
Phosphonate ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.626
AKH65926.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.620
lolD
Lipoprotein ABC transporter ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.
  
     0.611
AKH65231.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.563
AKH62479.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.535
btuD
Vitamin B12 ABC transporter ATPase; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system.
  
     0.520
ftsE
Cell division protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
  
     0.481
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
     0.475
Your Current Organism:
Photorhabdus thracensis
NCBI taxonomy Id: 230089
Other names: CIP 108426, DSM 15199, NCIMB 13952, P. thracensis, Photorhabdus luminescens subsp. thracensis, Photorhabdus luminescens subsp. thracensis Hazir et al. 2004, Photorhabdus temperata subsp. thracensis, Photorhabdus temperata subsp. thracensis (Hazir et al. 2004) Tailliez et al. 2010, strain 39-8
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