STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKH64920.1Baseplate protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (367 aa)    
Predicted Functional Partners:
AKH64921.1
Tail fiber protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.985
AKH64919.1
Baseplate protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.984
AKH64915.1
Phage P2 GpU family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.974
AKH64917.1
Bacteriophage regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.972
AKH64918.1
Baseplate protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.962
AKH64911.1
Tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.957
AKH64621.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.954
AKH63172.1
Tail assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.950
AKH63191.1
Tail protein X; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.948
AKH64912.1
Tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.936
Your Current Organism:
Photorhabdus thracensis
NCBI taxonomy Id: 230089
Other names: CIP 108426, DSM 15199, NCIMB 13952, P. thracensis, Photorhabdus luminescens subsp. thracensis, Photorhabdus luminescens subsp. thracensis Hazir et al. 2004, Photorhabdus temperata subsp. thracensis, Photorhabdus temperata subsp. thracensis (Hazir et al. 2004) Tailliez et al. 2010, strain 39-8
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.