Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000784355_00714 | cfiA | GCA_000784355_00714 | GCA_000784355_01516 | Oxalate oxidoreductase subunit beta. | 2-oxoglutarate carboxylase large subunit. | 0.987 |
GCA_000784355_00714 | korA_1 | GCA_000784355_00714 | GCA_000784355_01416 | Oxalate oxidoreductase subunit beta. | 2-oxoglutarate oxidoreductase subunit KorA. | 0.997 |
GCA_000784355_00714 | korA_2 | GCA_000784355_00714 | GCA_000784355_01906 | Oxalate oxidoreductase subunit beta. | 2-oxoglutarate oxidoreductase subunit KorA. | 0.997 |
GCA_000784355_00714 | padE_1 | GCA_000784355_00714 | GCA_000784355_00030 | Oxalate oxidoreductase subunit beta. | NADH-dependent phenylglyoxylate dehydrogenase subunit gamma. | 0.999 |
GCA_000784355_00714 | padE_2 | GCA_000784355_00714 | GCA_000784355_00711 | Oxalate oxidoreductase subunit beta. | NADH-dependent phenylglyoxylate dehydrogenase subunit gamma. | 0.999 |
GCA_000784355_00714 | padG | GCA_000784355_00714 | GCA_000784355_00713 | Oxalate oxidoreductase subunit beta. | NADH-dependent phenylglyoxylate dehydrogenase subunit alpha. | 0.999 |
GCA_000784355_00714 | porA | GCA_000784355_00714 | GCA_000784355_00029 | Oxalate oxidoreductase subunit beta. | Pyruvate synthase subunit PorA. | 0.999 |
GCA_000784355_00714 | porD_1 | GCA_000784355_00714 | GCA_000784355_00031 | Oxalate oxidoreductase subunit beta. | Pyruvate synthase subunit PorD. | 0.999 |
GCA_000784355_00714 | porD_2 | GCA_000784355_00714 | GCA_000784355_00712 | Oxalate oxidoreductase subunit beta. | Pyruvate synthase subunit PorD. | 0.999 |
GCA_000784355_00714 | ppsA | GCA_000784355_00714 | GCA_000784355_02066 | Oxalate oxidoreductase subunit beta. | Phosphoenolpyruvate synthase. | 0.993 |
cfiA | GCA_000784355_00714 | GCA_000784355_01516 | GCA_000784355_00714 | 2-oxoglutarate carboxylase large subunit. | Oxalate oxidoreductase subunit beta. | 0.987 |
cfiA | korA_1 | GCA_000784355_01516 | GCA_000784355_01416 | 2-oxoglutarate carboxylase large subunit. | 2-oxoglutarate oxidoreductase subunit KorA. | 0.986 |
cfiA | korA_2 | GCA_000784355_01516 | GCA_000784355_01906 | 2-oxoglutarate carboxylase large subunit. | 2-oxoglutarate oxidoreductase subunit KorA. | 0.986 |
cfiA | padE_1 | GCA_000784355_01516 | GCA_000784355_00030 | 2-oxoglutarate carboxylase large subunit. | NADH-dependent phenylglyoxylate dehydrogenase subunit gamma. | 0.987 |
cfiA | padE_2 | GCA_000784355_01516 | GCA_000784355_00711 | 2-oxoglutarate carboxylase large subunit. | NADH-dependent phenylglyoxylate dehydrogenase subunit gamma. | 0.991 |
cfiA | padG | GCA_000784355_01516 | GCA_000784355_00713 | 2-oxoglutarate carboxylase large subunit. | NADH-dependent phenylglyoxylate dehydrogenase subunit alpha. | 0.747 |
cfiA | porA | GCA_000784355_01516 | GCA_000784355_00029 | 2-oxoglutarate carboxylase large subunit. | Pyruvate synthase subunit PorA. | 0.986 |
cfiA | porD_1 | GCA_000784355_01516 | GCA_000784355_00031 | 2-oxoglutarate carboxylase large subunit. | Pyruvate synthase subunit PorD. | 0.992 |
cfiA | porD_2 | GCA_000784355_01516 | GCA_000784355_00712 | 2-oxoglutarate carboxylase large subunit. | Pyruvate synthase subunit PorD. | 0.986 |
cfiA | ppsA | GCA_000784355_01516 | GCA_000784355_02066 | 2-oxoglutarate carboxylase large subunit. | Phosphoenolpyruvate synthase. | 0.993 |
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