STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000784355_00997Hypothetical protein. (280 aa)    
Predicted Functional Partners:
GCA_000784355_01209
Hypothetical protein.
  
     0.602
GCA_000784355_00998
Hypothetical protein.
       0.558
pnp_1
Polyribonucleotide nucleotidyltransferase.
 
    0.556
GCA_000784355_01786
Hypothetical protein.
 
     0.551
trm1
tRNA (guanine(26)-N(2)/guanine(27)-N(2))-dimethyltransferase.
  
  
 0.551
GCA_000784355_01112
Hypothetical protein.
 
  
 0.544
GCA_000784355_00532
Hypothetical protein.
  
     0.533
groL
60 kDa chaperonin.
  
   
 0.531
GCA_000784355_00703
Hypothetical protein.
  
 
  0.528
efp
Elongation factor P.
  
     0.523
Your Current Organism:
Methanolacinia paynteri
NCBI taxonomy Id: 230356
Other names: ATCC 33997, DSM 2545, M. paynteri, Methanomicrobium paynteri, OCM 124, strain G-2000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.