STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
anfKNitrogenase iron-iron protein beta chain. (372 aa)    
Predicted Functional Partners:
nifH1_2
Nitrogenase iron protein 1.
 
 0.997
nifK_2
Nitrogenase molybdenum-iron protein beta chain.
 
 
  0.997
nifH1_3
Nitrogenase iron protein 1.
 
 0.993
nifD_2
Nitrogenase molybdenum-iron protein alpha chain.
 
 0.990
nifH1_1
Nitrogenase iron protein 1.
 
 0.989
vnfD
Nitrogenase vanadium-iron protein alpha chain.
 
0.986
glnA
Glutamine synthetase.
   
 
 0.961
glnB_4
Nitrogen regulatory protein P-II.
  
 
 0.954
gdhA
Glutamate dehydrogenase.
     
 0.949
nifD_1
Nitrogenase molybdenum-iron protein alpha chain.
 
 0.941
Your Current Organism:
Methanolacinia paynteri
NCBI taxonomy Id: 230356
Other names: ATCC 33997, DSM 2545, M. paynteri, Methanomicrobium paynteri, OCM 124, strain G-2000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.