STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptlH_3Type IV secretion system protein PtlH. (706 aa)    
Predicted Functional Partners:
GCA_000784355_01677
Hypothetical protein.
 
  
 0.939
GCA_000784355_01391
Hypothetical protein.
 
  
 0.800
GCA_000784355_01392
Hypothetical protein.
 
  
 0.780
GCA_000784355_01679
Hypothetical protein.
       0.773
GCA_000784355_02095
Hypothetical protein.
 
  
 0.748
GCA_000784355_01940
Hypothetical protein.
 
  
 0.735
GCA_000784355_01179
Hypothetical protein.
 
  
 0.734
GCA_000784355_02703
Hypothetical protein.
  
  
 0.716
GCA_000784355_02699
Hypothetical protein.
  
  
 0.687
GCA_000784355_01675
Hypothetical protein.
       0.675
Your Current Organism:
Methanolacinia paynteri
NCBI taxonomy Id: 230356
Other names: ATCC 33997, DSM 2545, M. paynteri, Methanomicrobium paynteri, OCM 124, strain G-2000
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.