Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000784355_02336 | hycD_1 | GCA_000784355_02336 | GCA_000784355_02337 | Hypothetical protein. | Formate hydrogenlyase subunit 4. | 0.993 |
GCA_000784355_02336 | hycD_2 | GCA_000784355_02336 | GCA_000784355_02490 | Hypothetical protein. | Formate hydrogenlyase subunit 4. | 0.859 |
GCA_000784355_02336 | hycE_1 | GCA_000784355_02336 | GCA_000784355_02177 | Hypothetical protein. | Formate hydrogenlyase subunit 5. | 0.907 |
GCA_000784355_02336 | hycE_2 | GCA_000784355_02336 | GCA_000784355_02334 | Hypothetical protein. | Formate hydrogenlyase subunit 5. | 0.998 |
GCA_000784355_02336 | hycE_3 | GCA_000784355_02336 | GCA_000784355_02491 | Hypothetical protein. | Formate hydrogenlyase subunit 5. | 0.907 |
GCA_000784355_02336 | hycG_3 | GCA_000784355_02336 | GCA_000784355_02333 | Hypothetical protein. | Formate hydrogenlyase subunit 7. | 0.989 |
GCA_000784355_02336 | hyfB_1 | GCA_000784355_02336 | GCA_000784355_02335 | Hypothetical protein. | Hydrogenase-4 component B. | 0.992 |
GCA_000784355_02336 | hyfB_2 | GCA_000784355_02336 | GCA_000784355_02338 | Hypothetical protein. | Hydrogenase-4 component B. | 0.990 |
GCA_000784355_02336 | mrpD | GCA_000784355_02336 | GCA_000784355_02495 | Hypothetical protein. | Na(+)/H(+) antiporter subunit D. | 0.884 |
GCA_000784355_02336 | ndhI_5 | GCA_000784355_02336 | GCA_000784355_02489 | Hypothetical protein. | NAD(P)H-quinone oxidoreductase subunit I. | 0.773 |
hycD_1 | GCA_000784355_02336 | GCA_000784355_02337 | GCA_000784355_02336 | Formate hydrogenlyase subunit 4. | Hypothetical protein. | 0.993 |
hycD_1 | hycE_1 | GCA_000784355_02337 | GCA_000784355_02177 | Formate hydrogenlyase subunit 4. | Formate hydrogenlyase subunit 5. | 0.952 |
hycD_1 | hycE_2 | GCA_000784355_02337 | GCA_000784355_02334 | Formate hydrogenlyase subunit 4. | Formate hydrogenlyase subunit 5. | 0.999 |
hycD_1 | hycE_3 | GCA_000784355_02337 | GCA_000784355_02491 | Formate hydrogenlyase subunit 4. | Formate hydrogenlyase subunit 5. | 0.952 |
hycD_1 | hycG_3 | GCA_000784355_02337 | GCA_000784355_02333 | Formate hydrogenlyase subunit 4. | Formate hydrogenlyase subunit 7. | 0.997 |
hycD_1 | hyfB_1 | GCA_000784355_02337 | GCA_000784355_02335 | Formate hydrogenlyase subunit 4. | Hydrogenase-4 component B. | 0.998 |
hycD_1 | hyfB_2 | GCA_000784355_02337 | GCA_000784355_02338 | Formate hydrogenlyase subunit 4. | Hydrogenase-4 component B. | 0.997 |
hycD_1 | mrpD | GCA_000784355_02337 | GCA_000784355_02495 | Formate hydrogenlyase subunit 4. | Na(+)/H(+) antiporter subunit D. | 0.974 |
hycD_1 | ndhI_5 | GCA_000784355_02337 | GCA_000784355_02489 | Formate hydrogenlyase subunit 4. | NAD(P)H-quinone oxidoreductase subunit I. | 0.980 |
hycD_2 | GCA_000784355_02336 | GCA_000784355_02490 | GCA_000784355_02336 | Formate hydrogenlyase subunit 4. | Hypothetical protein. | 0.859 |
page 1 of 6