STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fdhF_4Formate dehydrogenase H. (688 aa)    
Predicted Functional Partners:
GCA_000784355_02541
Hypothetical protein.
  
 0.997
GCA_000784355_01631
Putative thiazole biosynthetic enzyme.
   
 0.991
cutD
Choline trimethylamine-lyase activating enzyme.
   
 0.991
fhcC_2
Formyltransferase/hydrolase complex Fhc subunit C.
  
 0.991
GCA_000784355_02331
Hypothetical protein.
  
 0.990
GCA_000784355_02343
Hypothetical protein.
  
 0.990
fhcC_1
Formyltransferase/hydrolase complex Fhc subunit C.
  
 0.990
fhcA_2
Formyltransferase/hydrolase complex Fhc subunit A.
  
 0.989
nuoI
NADH-quinone oxidoreductase subunit I.
   
  0.988
fhcA_1
Formyltransferase/hydrolase complex Fhc subunit A.
  
 0.988
Your Current Organism:
Methanolacinia paynteri
NCBI taxonomy Id: 230356
Other names: ATCC 33997, DSM 2545, M. paynteri, Methanomicrobium paynteri, OCM 124, strain G-2000
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.