STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3KEU9IBR domain-containing protein. (1466 aa)    
Predicted Functional Partners:
A0A5C3L7V0
Ubiquitin conjugating enzyme family protein.
    
 0.673
A0A5C3KKT5
Uncharacterized protein.
    
  0.664
A0A5C3KQY2
RBR-type E3 ubiquitin transferase.
    
 0.645
A0A5C3L0U7
RING-type domain-containing protein.
    
 0.645
A0A5C3L131
RING-type domain-containing protein.
    
 0.645
A0A5C3L6M4
Alpha/beta-hydrolase.
    
 0.645
A0A5C3KIE3
Ubiquitin-domain-containing protein.
    
  0.642
A0A5C3LLX8
Ubiquitin-40S ribosomal protein S31 fusion protein.
    
  0.642
A0A5C3KIQ9
Uncharacterized protein.
   
  0.637
A0A5C3KN25
Ubiquitin-60S ribosomal protein L40, variant.
    
  0.637
Your Current Organism:
Coprinopsis marcescibilis
NCBI taxonomy Id: 230819
Other names: C. marcescibilis, Coprinopsis marcescibilis (Britzelm.) Oerstadius & E. Larss. 2008, Psathyrella marcescibilis
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.