STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3KIA5Aldo/keto reductase. (412 aa)    
Predicted Functional Partners:
A0A5C3LDI5
Methyltransferase type 11.
   
 0.732
A0A5C3KPV2
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.730
A0A5C3LBS1
Tryptophan synthase.
     
 0.662
A0A5C3KF77
Voltage-gated potassium channel.
    
 0.655
A0A5C3KRF6
Cytochrome b2.
   
 
 0.626
A0A5C3LPB8
Cytochrome b2; Belongs to the cytochrome b5 family.
   
 
 0.626
A0A5C3KCR7
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.613
A0A5C3KKF2
Nuclear pore protein seh1; Belongs to the WD repeat SEC13 family.
    
 0.598
A0A5C3KEI1
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.564
A0A5C3KQT7
Protein transporter SEC13; Belongs to the WD repeat SEC13 family.
    
 0.564
Your Current Organism:
Coprinopsis marcescibilis
NCBI taxonomy Id: 230819
Other names: C. marcescibilis, Coprinopsis marcescibilis (Britzelm.) Oerstadius & E. Larss. 2008, Psathyrella marcescibilis
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