Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A5C3KC83 | A0A5C3KE00 | F-box domain-containing protein. | Smarcc1 protein. | 0.923 |
A0A5C3KC83 | A0A5C3KHB4 | F-box domain-containing protein. | SNF5-domain-containing protein. | 0.909 |
A0A5C3KC83 | A0A5C3KN33 | F-box domain-containing protein. | Uncharacterized protein. | 0.612 |
A0A5C3KC83 | A0A5C3KT05 | F-box domain-containing protein. | Uncharacterized protein. | 0.907 |
A0A5C3KC83 | A0A5C3L3A2 | F-box domain-containing protein. | SWI/SNF complex 60 kDa subunit. | 0.916 |
A0A5C3KC83 | A0A5C3L818 | F-box domain-containing protein. | RRM domain-containing protein. | 0.510 |
A0A5C3KC83 | A0A5C3L9Q9 | F-box domain-containing protein. | SNF5-domain-containing protein. | 0.995 |
A0A5C3KC83 | A0A5C3LDK3 | F-box domain-containing protein. | SWIB-domain-containing protein. | 0.875 |
A0A5C3KC83 | A0A5C3LF15 | F-box domain-containing protein. | Actin/actin-like protein; Belongs to the actin family. | 0.940 |
A0A5C3KE00 | A0A5C3KC83 | Smarcc1 protein. | F-box domain-containing protein. | 0.923 |
A0A5C3KE00 | A0A5C3KHB4 | Smarcc1 protein. | SNF5-domain-containing protein. | 0.997 |
A0A5C3KE00 | A0A5C3KKE5 | Smarcc1 protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.923 |
A0A5C3KE00 | A0A5C3KN33 | Smarcc1 protein. | Uncharacterized protein. | 0.794 |
A0A5C3KE00 | A0A5C3KT05 | Smarcc1 protein. | Uncharacterized protein. | 0.995 |
A0A5C3KE00 | A0A5C3L3A2 | Smarcc1 protein. | SWI/SNF complex 60 kDa subunit. | 0.996 |
A0A5C3KE00 | A0A5C3L9Q9 | Smarcc1 protein. | SNF5-domain-containing protein. | 0.997 |
A0A5C3KE00 | A0A5C3LDK3 | Smarcc1 protein. | SWIB-domain-containing protein. | 0.967 |
A0A5C3KE00 | A0A5C3LF15 | Smarcc1 protein. | Actin/actin-like protein; Belongs to the actin family. | 0.991 |
A0A5C3KHB4 | A0A5C3KC83 | SNF5-domain-containing protein. | F-box domain-containing protein. | 0.909 |
A0A5C3KHB4 | A0A5C3KE00 | SNF5-domain-containing protein. | Smarcc1 protein. | 0.997 |
page 1 of 5