STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3KNA8Lateendosome to vacuole transport-family protein. (1350 aa)    
Predicted Functional Partners:
A0A5C3KM95
Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.
    
 
 0.988
A0A5C3KQX8
E3 ubiquitin-protein ligase PEP5.
    
 
 0.988
A0A5C3LF49
DigA protein.
    
 
 0.988
A0A5C3L279
ATP binding protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.983
A0A5C3L546
CNH domain-containing protein.
   
 
 0.900
A0A5C3KGP0
Uncharacterized protein.
   
 
 0.885
A0A5C3KNC1
CNH domain-containing protein.
   
 
 0.885
A0A5C3L3H7
GTP-binding protein RAB5.
    
 
 0.749
A0A5C3L6K6
Alginate_lyase domain-containing protein.
    
 
 0.749
A0A5C3LCK5
GTP-binding protein ypt5.
    
 
 0.749
Your Current Organism:
Coprinopsis marcescibilis
NCBI taxonomy Id: 230819
Other names: C. marcescibilis, Coprinopsis marcescibilis (Britzelm.) Oerstadius & E. Larss. 2008, Psathyrella marcescibilis
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