STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3KSZ8Uncharacterized protein. (405 aa)    
Predicted Functional Partners:
A0A5C3KY98
Uncharacterized protein.
  
     0.471
A0A5C3KG07
Uncharacterized protein.
  
     0.448
A0A5C3L6C6
Uncharacterized protein.
  
     0.436
A0A5C3KG79
Uncharacterized protein.
  
     0.424
A0A5C3LIC5
Uncharacterized protein.
  
     0.418
A0A5C3L9Q7
Uncharacterized protein.
  
     0.417
A0A5C3KNZ7
Uncharacterized protein.
  
     0.408
Your Current Organism:
Coprinopsis marcescibilis
NCBI taxonomy Id: 230819
Other names: C. marcescibilis, Coprinopsis marcescibilis (Britzelm.) Oerstadius & E. Larss. 2008, Psathyrella marcescibilis
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