STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3KV39G domain-containing protein. (305 aa)    
Predicted Functional Partners:
A0A5C3L440
B30.2/SPRY domain-containing protein.
    
 0.632
A0A5C3L6I2
WD40 repeat-like protein.
    
 0.632
A0A5C3KPV2
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.631
A0A5C3KVK9
UBA domain-containing protein.
    
 0.631
A0A5C3LDI5
Methyltransferase type 11.
    
 0.630
A0A5C3KCR7
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.623
A0A5C3L8I8
Uncharacterized protein.
    
  0.620
A0A5C3KDJ3
TPR_REGION domain-containing protein.
    
 0.616
A0A5C3KKF2
Nuclear pore protein seh1; Belongs to the WD repeat SEC13 family.
    
 0.604
A0A5C3KSX3
Ubiquitin.
    
  0.572
Your Current Organism:
Coprinopsis marcescibilis
NCBI taxonomy Id: 230819
Other names: C. marcescibilis, Coprinopsis marcescibilis (Britzelm.) Oerstadius & E. Larss. 2008, Psathyrella marcescibilis
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