STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3KVE7Di-copper centre-containing protein. (360 aa)    
Predicted Functional Partners:
A0A5C3L1P4
Actin depolymerizing protein.
    
 
 0.659
A0A5C3L4W7
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
    
 0.560
A0A5C3KUH1
Di-copper centre-containing protein.
  
  
 
0.549
A0A5C3LQ71
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.505
A0A5C3KJ06
DNA-directed RNA polymerase II subunit.
    
  0.501
A0A5C3L2C1
DNA-directed RNA polymerase I.
    
  0.501
A0A5C3LCL4
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
  0.501
A0A5C3LDH2
Insert subdomain of RNA polymerase alpha subunit.
    
  0.477
A0A5C3LAB7
RPOL4c domain-containing protein.
    
  0.468
A0A5C3L0C4
DNA-directed RNA polymerase II.
    
  0.438
Your Current Organism:
Coprinopsis marcescibilis
NCBI taxonomy Id: 230819
Other names: C. marcescibilis, Coprinopsis marcescibilis (Britzelm.) Oerstadius & E. Larss. 2008, Psathyrella marcescibilis
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.