STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3KVR5Uncharacterized protein. (85 aa)    
Predicted Functional Partners:
A0A5C3KYM7
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.700
A0A5C3L245
Translational machinery component.
    
  0.672
A0A5C3L1C3
WD40 repeat-like protein.
    
 0.665
A0A5C3L3K2
Mitochondrial ribosomal protein subunit S2.
   
  0.644
A0A5C3KXY3
SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family.
    
  0.643
A0A5C3KQA0
S15/NS1 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
   
  0.640
A0A5C3L346
Uncharacterized protein.
    
 0.640
A0A5C3LCM2
Ribosomal protein S16.
   
  0.640
A0A5C3LCN2
Uncharacterized protein.
    
 0.640
A0A5C3KU75
Mitochondrial carrier protein.
    
  0.637
Your Current Organism:
Coprinopsis marcescibilis
NCBI taxonomy Id: 230819
Other names: C. marcescibilis, Coprinopsis marcescibilis (Britzelm.) Oerstadius & E. Larss. 2008, Psathyrella marcescibilis
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