STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3KX54JmjC domain-containing histone demethylation protein 1. (590 aa)    
Predicted Functional Partners:
A0A5C3KFL1
Uncharacterized protein.
   
 0.999
A0A5C3KGI1
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
   
 0.999
A0A5C3KIV5
Uncharacterized protein.
   
 0.999
A0A5C3L1F9
Uncharacterized protein.
   
 0.999
A0A5C3LCU5
E3 ubiquitin ligase SCF complex, Skp subunit; Belongs to the SKP1 family.
   
 0.999
A0A5C3KL06
RING/U-box.
    
 0.992
A0A5C3KSX3
Ubiquitin.
    
 0.991
A0A5C3L765
TIP120-domain-containing protein.
    
 0.964
A0A5C3KMD1
NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric UBA3-ULA1 E1 enzyme.
    
 0.963
A0A5C3LBL2
NEDD8 activating enzyme.
    
 0.963
Your Current Organism:
Coprinopsis marcescibilis
NCBI taxonomy Id: 230819
Other names: C. marcescibilis, Coprinopsis marcescibilis (Britzelm.) Oerstadius & E. Larss. 2008, Psathyrella marcescibilis
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