STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3KXK626S proteasome subunit P45. (858 aa)    
Predicted Functional Partners:
A0A5C3KB00
Proteasome subunit alpha type.
   
 0.999
A0A5C3KGK4
Mov34-domain-containing protein.
   
 0.999
A0A5C3KJF6
26S proteasome subunit P45; Belongs to the AAA ATPase family.
  
0.999
A0A5C3KQH2
26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
   
 0.999
A0A5C3L0L4
ATPase; Belongs to the AAA ATPase family.
  
0.999
A0A5C3L1S1
Proteasome 26S subunit.
   
 0.999
A0A5C3L414
26S proteasome subunit P45; Belongs to the AAA ATPase family.
  
0.999
A0A5C3L636
Endopeptidase; Belongs to the AAA ATPase family.
  
0.999
A0A5C3L6M6
26S proteasome subunit P45; Belongs to the AAA ATPase family.
  
0.999
A0A5C3L777
Multidrug resistance protein.
   
 0.999
Your Current Organism:
Coprinopsis marcescibilis
NCBI taxonomy Id: 230819
Other names: C. marcescibilis, Coprinopsis marcescibilis (Britzelm.) Oerstadius & E. Larss. 2008, Psathyrella marcescibilis
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