STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3KY96TRAUB-domain-containing protein. (498 aa)    
Predicted Functional Partners:
A0A5C3KKQ8
WD repeat-containing protein.
   
 
 0.997
NAT10
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 
 0.997
A0A5C3KZD7
Utp14-domain-containing protein.
   
 
 0.997
A0A5C3L0L3
Nucleolar protein 14.
   
 
 0.997
A0A5C3LDH3
NUC189-domain-containing protein.
   
 
 0.997
A0A5C3LE28
Eukaryotic type KH-domain (KH-domain type I).
   
 
 0.997
A0A5C3KT74
WD repeat-containing protein 46.
   
 
 0.996
A0A5C3L8K7
WD-repeat-containing protein.
   
 
 0.996
A0A5C3LAL2
SnoRNA binding protein.
   
   0.996
A0A5C3LAN3
Uncharacterized protein.
   
 
 0.996
Your Current Organism:
Coprinopsis marcescibilis
NCBI taxonomy Id: 230819
Other names: C. marcescibilis, Coprinopsis marcescibilis (Britzelm.) Oerstadius & E. Larss. 2008, Psathyrella marcescibilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.