STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3L0K1C2H2-type domain-containing protein. (270 aa)    
Predicted Functional Partners:
A0A5C3L5X4
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
    
 
 0.696
A0A5C3KMK7
Proteasome subunit alpha type.
    
 
 0.690
A0A5C3L790
VWFA domain-containing protein.
    
 
 0.662
A0A5C3L9Q5
SPX-domain-containing protein.
   
 
 0.641
A0A5C3LCJ7
Uncharacterized protein.
    
 
 0.626
A0A5C3L866
Uncharacterized protein.
    
 
 0.625
A0A5C3L6I2
WD40 repeat-like protein.
    
 
 0.617
A0A5C3L1D7
Uncharacterized protein.
    
   0.614
A0A5C3LA85
E3 ubiquitin protein ligase.
    
   0.614
A0A5C3KXK6
26S proteasome subunit P45.
    
 
 0.536
Your Current Organism:
Coprinopsis marcescibilis
NCBI taxonomy Id: 230819
Other names: C. marcescibilis, Coprinopsis marcescibilis (Britzelm.) Oerstadius & E. Larss. 2008, Psathyrella marcescibilis
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