STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3L185Uncharacterized protein. (81 aa)    
Predicted Functional Partners:
A0A5C3KMF8
BZIP domain-containing protein.
    
 0.930
A0A5C3L2D7
BZIP domain-containing protein.
    
 0.930
A0A5C3L603
50s ribosomal protein; Belongs to the universal ribosomal protein uL6 family.
    
  0.896
A0A5C3L9M4
60S ribosomal protein L9.
    
  0.873
A0A5C3KCN0
Ribosomal protein S19/S15; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.872
A0A5C3L4Q7
Ribosomal protein S12.
   
 
 0.857
A0A5C3KYI8
Uncharacterized protein.
   
   0.855
A0A5C3L245
Translational machinery component.
   
 
 0.851
A0A5C3KXX7
37S ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.848
A0A5C3LCP1
Uncharacterized protein.
   
 
 0.848
Your Current Organism:
Coprinopsis marcescibilis
NCBI taxonomy Id: 230819
Other names: C. marcescibilis, Coprinopsis marcescibilis (Britzelm.) Oerstadius & E. Larss. 2008, Psathyrella marcescibilis
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