STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3L5A1Carnitine acetyl transferase. (670 aa)    
Predicted Functional Partners:
A0A5C3L4Z6
Peroxisomal hydratase-dehydrogenase-epimerase.
   
 0.911
A0A5C3KW73
Carnitine acetyl transferase; Belongs to the carnitine/choline acetyltransferase family.
  
0.876
A0A5C3L8Z8
Peroxisomal dehydratase.
   
 0.835
A0A5C3L0P4
Carnitine acetyl transferase; Belongs to the carnitine/choline acetyltransferase family.
  
  
 
0.795
A0A5C3KU16
Peroxisome targeting signal receptor.
    
 0.793
A0A5C3L1H2
TPR-like protein.
    
 0.793
A0A5C3K970
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.779
A0A5C3KLF2
Sterol-binding-like protein.
   
 0.737
A0A5C3L9Q5
SPX-domain-containing protein.
    
 0.736
A0A5C3LDF1
Carnitine/acyl carnitine carrier; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
 0.726
Your Current Organism:
Coprinopsis marcescibilis
NCBI taxonomy Id: 230819
Other names: C. marcescibilis, Coprinopsis marcescibilis (Britzelm.) Oerstadius & E. Larss. 2008, Psathyrella marcescibilis
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