STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3L624Kin17_mid domain-containing protein. (303 aa)    
Predicted Functional Partners:
A0A5C3L1S0
Uncharacterized protein.
    
 0.873
A0A5C3KZJ1
RNA-binding domain-containing protein.
   
   0.851
A0A5C3LDG7
Matrin-type domain-containing protein.
    
 
 0.839
A0A5C3LA43
RNA splicing factor PRP9.
    
 
 0.838
A0A5C3KPW8
Pre-mRNA-splicing factor RSE1.
    
   0.823
A0A5C3LAN0
Small nuclear ribonucleo protein.
    
   0.823
A0A5C3KXX8
PRP38-domain-containing protein.
   
   0.802
A0A5C3L476
Pre-mRNA-splicing factor CWC26.
   
   0.802
A0A5C3LBU7
Pre-mRNA-processing protein 45.
  
   0.791
A0A5C3L3N6
Calreticulin-domain-containing protein.
    
   0.784
Your Current Organism:
Coprinopsis marcescibilis
NCBI taxonomy Id: 230819
Other names: C. marcescibilis, Coprinopsis marcescibilis (Britzelm.) Oerstadius & E. Larss. 2008, Psathyrella marcescibilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.