STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3L8N2Uncharacterized protein. (929 aa)    
Predicted Functional Partners:
A0A5C3KZC0
Uncharacterized protein.
    
 0.806
A0A5C3KS61
Spindle pole body component.
    
 0.786
A0A5C3KXV7
Spindle pole body component.
    
 0.786
A0A5C3L225
Uncharacterized protein.
    
 0.786
A0A5C3KXN0
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
   
 0.775
A0A5C3KU45
Spindle pole body component.
    
 0.751
A0A5C3LCW8
Spindle pole body component.
    
 0.731
A0A5C3KKB7
Carboxyl transferase.
   
 0.654
A0A5C3LIV8
Propionyl-CoA carboxylase.
   
 0.654
A0A5C3KU75
Mitochondrial carrier protein.
   
   0.629
Your Current Organism:
Coprinopsis marcescibilis
NCBI taxonomy Id: 230819
Other names: C. marcescibilis, Coprinopsis marcescibilis (Britzelm.) Oerstadius & E. Larss. 2008, Psathyrella marcescibilis
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