STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3LAV0Uncharacterized protein. (833 aa)    
Predicted Functional Partners:
A0A5C3KXX7
37S ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.896
A0A5C3KUX6
Alpha-L RNA-binding motif-containing protein.
   
 
 0.830
A0A5C3LDC4
Nucleic acid-binding protein.
   
 
 0.827
A0A5C3KPH7
Mitochondrial ribosomal protein subunit S8.
   
   0.824
A0A5C3LCP1
Uncharacterized protein.
    
   0.823
A0A5C3KZC0
Uncharacterized protein.
    
 0.806
A0A5C3L3K2
Mitochondrial ribosomal protein subunit S2.
   
 
 0.806
A0A5C3KS61
Spindle pole body component.
    
 0.786
A0A5C3KXV7
Spindle pole body component.
    
 0.786
A0A5C3L225
Uncharacterized protein.
    
 0.786
Your Current Organism:
Coprinopsis marcescibilis
NCBI taxonomy Id: 230819
Other names: C. marcescibilis, Coprinopsis marcescibilis (Britzelm.) Oerstadius & E. Larss. 2008, Psathyrella marcescibilis
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