STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3LBX5Amidohydrolase. (1104 aa)    
Predicted Functional Partners:
A0A5C3LBF6
Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 0.929
A0A5C3LEW5
FMN-linked oxidoreductase.
  
 0.929
A0A5C3KKB4
Carbamoyl-phosphate synthase subunit arginine-specific large.
  
 0.916
A0A5C3L3T0
Aspartate carbamoyltransferase.
  
 0.916
A0A5C3L6S4
Carbamoyl-phosphate synthase.
  
 0.916
A0A5C3LK21
Purine permease.
  
  
 0.909
A0A5C3KY84
Uncharacterized protein.
  
 
 0.842
A0A5C3KZ03
Got1-domain-containing protein.
  
 
 0.842
A0A5C3LB69
Uncharacterized protein.
  
 
 0.842
A0A5C3KKE2
Uncharacterized protein.
  
 
 0.832
Your Current Organism:
Coprinopsis marcescibilis
NCBI taxonomy Id: 230819
Other names: C. marcescibilis, Coprinopsis marcescibilis (Britzelm.) Oerstadius & E. Larss. 2008, Psathyrella marcescibilis
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