STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3LF65UBIQUITIN_CONJUGAT_2 domain-containing protein. (930 aa)    
Predicted Functional Partners:
A0A5C3LCR6
Ubiquitin-protein ligase.
   
 0.927
A0A5C3L215
Ubiquitin activating enzyme.
  
 0.892
A0A5C3L675
Ubiquitin conjugation factor E4.
   
 0.890
A0A5C3KUS8
UBC-like protein.
   
 0.883
A0A5C3KN25
Ubiquitin-60S ribosomal protein L40, variant.
   
 0.849
A0A5C3KRK2
Uncharacterized protein.
   
 0.849
A0A5C3KRK4
Uncharacterized protein.
   
 0.849
A0A5C3LBL2
NEDD8 activating enzyme.
   
 0.835
A0A5C3KMQ1
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 and ATG8 for its conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Autophagy is essential for maintenance of amino acid levels and protein synthesis under nitrogen starvation. Required for selective autophagic degradation of the nucleus (nucleophagy) as well as for mitophagy wh [...]
   
 0.830
A0A5C3LEE7
Uncharacterized protein.
    
 0.822
Your Current Organism:
Coprinopsis marcescibilis
NCBI taxonomy Id: 230819
Other names: C. marcescibilis, Coprinopsis marcescibilis (Britzelm.) Oerstadius & E. Larss. 2008, Psathyrella marcescibilis
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