STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RorbRAR related orphan receptor B. (470 aa)    
Predicted Functional Partners:
Ncoa1
Nuclear receptor coactivator 1.
    
 0.936
Rora
RAR related orphan receptor A.
  
 
0.886
Nrip1
Nuclear receptor interacting protein 1.
    
 0.886
Rorc
RAR-related orphan receptor gamma.
  
 
0.879
Ncor1
Nuclear receptor co-repressor 1.
    
 0.856
Ncor2
Nuclear receptor co-repressor 2.
    
 0.855
ENSPEMP00000021503
annotation not available
    
 0.847
Foxp3
Forkhead box P3.
    
 0.832
Arntl
Aryl hydrocarbon receptor nuclear translocator like.
    
 0.829
Clock
Clock circadian regulator.
    
 0.824
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.