STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpa3Carboxypeptidase A3. (417 aa)    
Predicted Functional Partners:
Cma1
Chymase 1, mast cell.
   
 0.963
Ms4a2
Membrane-spanning 4-domains, subfamily A, member 2.
   
  
 0.924
Fcer1a
Fc receptor, IgE, high affinity I, alpha polypeptide.
   
  
 0.875
Cpa1
Carboxypeptidase A1.
  
  
0.863
Hdc
Histidine decarboxylase.
   
  
 0.848
Cpa4
Carboxypeptidase A4.
  
  
0.837
Cpa2
Carboxypeptidase A2.
  
  
0.836
Cpa5
Carboxypeptidase A5.
  
  
0.761
LOC102918411
Mast cell protease 4-like.
   
 0.706
Lxn
Latexin.
    
 
 0.620
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.