STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrrc34Leucine rich repeat containing 34. (415 aa)    
Predicted Functional Partners:
Ttc30b
Tetratricopeptide repeat domain 30B.
   
    0.730
Ttc30a1
Tetratricopeptide repeat domain 30A1.
   
    0.730
Rsph14
Radial spoke head 14 homolog.
    
 
 0.691
Insyn2b
Inhibitory synaptic factor family member 2B.
    
 
 0.659
Dlec1
Deleted in lung and esophageal cancer 1.
    
 0.650
Ccdc65
Coiled-coil domain containing 65.
    
 
 0.647
Rps27a
Ribosomal protein S27a.
    
  0.620
ENSPEMP00000017817
annotation not available
    
  0.620
Mynn
Myoneurin.
     
 0.612
Cfap161
Cilia and flagella associated protein 161.
   
  
 0.600
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.