STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D11Wsu47eDNA segment, Chr 11, Wayne State University 47, expressed. (550 aa)    
Predicted Functional Partners:
Atp5j
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F.
   
 0.998
Atp5pd
ATP synthase peripheral stalk subunit d.
   
 0.997
Atp5d
ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit.
   
 0.997
Atp5c1
ATP synthase F1 subunit gamma.
   
 0.997
ENSPEMP00000031769
annotation not available
   
 0.997
Atp5me
ATP synthase membrane subunit e.
   
 0.997
ENSPEMP00000034751
annotation not available
   
 0.997
Atp5mg
ATP synthase membrane subunit g.
   
 0.995
ENSPEMP00000032723
annotation not available
   
 0.995
Atp5b
ATP synthase F1 subunit beta.
   
 0.994
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.