STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PnkpPolynucleotide kinase 3'-phosphatase. (522 aa)    
Predicted Functional Partners:
ENSPEMP00000009037
annotation not available
  
 
 0.982
Xrcc1
X-ray repair cross complementing 1.
   
 0.982
Fcsk
Fucose kinase.
  
 
 0.980
Polb
DNA polymerase beta.
    
 0.970
Lig3
Ligase III, DNA, ATP-dependent.
   
 0.960
Gmds
GDP-mannose 4, 6-dehydratase.
    
 0.901
Lig4
Ligase IV, DNA, ATP-dependent.
   
 0.893
Poll
DNA polymerase lambda.
    
 0.892
Med10
Mediator complex subunit 10.
     
 0.880
Ankrd31
Ankyrin repeat domain 31.
    
 
 0.872
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.