STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slc2a12Solute carrier family 2 member 12. (618 aa)    
Predicted Functional Partners:
Rtcb
RNA 2',3'-cyclic phosphate and 5'-OH ligase.
    
 0.858
ENSPEMP00000020018
annotation not available
    
 0.853
Med17
Mediator complex subunit 17.
    
 0.806
ENSPEMP00000020856
annotation not available
   
 
 0.798
Ccnc
Cyclin C.
    
 0.797
Med7
Mediator complex subunit 7.
    
  0.795
Mrps12
Mitochondrial ribosomal protein S12.
    
 0.785
Mrps15
Mitochondrial ribosomal protein S15.
   
  0.782
Mrpl4
Mitochondrial ribosomal protein L4.
    
  0.781
Mrps7
Mitochondrial ribosomal protein S7.
    
  0.781
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.