STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rad9aRAD9 checkpoint clamp component A. (389 aa)    
Predicted Functional Partners:
Rad1
RAD1 checkpoint DNA exonuclease.
    
 0.998
Rad17
RAD17 checkpoint clamp loader component.
   
 0.997
Wrn
Werner syndrome RecQ like helicase.
   
 0.995
Hus1
HUS1 checkpoint clamp component.
    
 0.993
Hus1b
HUS1 checkpoint clamp component B.
    
 0.990
Topbp1
DNA topoisomerase II binding protein 1.
    
 0.985
Rfc4
Replication factor C subunit 4.
   
 0.984
Slf1
SMC5-SMC6 complex localization factor 1.
    
 0.984
Rfc2
Replication factor C (activator 1) 2.
   
 0.983
Rfc3
Replication factor C (activator 1) 3.
   
 0.981
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.