STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CtsoCathepsin O. (302 aa)    
Predicted Functional Partners:
Ctsb
Cathepsin B.
  
0.885
Ctsc
Cathepsin C.
   
0.877
Ctsz
Cathepsin Z.
   
0.863
Ctsh
Cathepsin H.
  
0.859
Ctsf
Cathepsin F.
  
  
0.836
Xiap
X-linked inhibitor of apoptosis.
     
 0.836
Bcl2
B cell leukemia/lymphoma 2.
     
 0.836
Bcl2l1
BCL2 like 1.
     
 0.836
Ctss
Cathepsin S.
  
0.812
Ctsk
Cathepsin K.
  
0.810
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.