STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dmp1Dentin matrix protein 1. (473 aa)    
Predicted Functional Partners:
Itgb3
Integrin subunit beta 3.
    
  0.851
Itgb5
Integrin subunit beta 5.
    
  0.821
Itgb1
Integrin subunit beta 1.
    
 0.781
Fam20c
FAM20C golgi associated secretory pathway kinase.
    
 0.778
Cdc73
Cell division cycle 73, Paf1/RNA polymerase II complex component.
    
 0.765
Paf1
PAF1 homolog, Paf1/RNA polymerase II complex component.
    
 0.747
Ctr9
CTR9 homolog, Paf1/RNA polymerase II complex component.
    
 0.729
Cinp
Cyclin dependent kinase 2 interacting protein.
    
 0.729
C8b
Complement C8 beta chain.
   
 0.726
Itgb2l
Integrin beta 2-like.
    
 0.722
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.