Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Gabra4Gamma-aminobutyric acid (GABA) A receptor, subunit alpha 4. (578 aa)    
Predicted Functional Partners:
Gabrb3
Gamma-aminobutyric acid type A receptor beta3 subunit.
   
 0.976
Gabrg2
Gamma-aminobutyric acid type A receptor gamma2 subunit.
   
 0.974
Gphn
Gephyrin.
    
 0.973
Gabrd
Gamma-aminobutyric acid type A receptor delta subunit.
   
 0.966
Nsf
N-ethylmaleimide sensitive fusion protein.
    
 0.943
Gabarap
GABA type A receptor-associated protein.
    
 0.938
ENSPEMP00000032159
annotation not available
    
 0.938
Gabarapl1
GABA type A receptor associated protein like 1.
    
 0.938
ENSPEMP00000006663
annotation not available
    
 0.936
Gabarapl2
GABA type A receptor associated protein like 2.
    
 0.936
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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