STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MrtfbMyocardin related transcription factor B. (1050 aa)    
Predicted Functional Partners:
Srf
Serum response factor.
    
 0.995
Map2k4
Mitogen-activated protein kinase kinase 4.
   
 0.879
Map2k1
Mitogen-activated protein kinase kinase 1.
   
 0.874
Map2k5
Mitogen-activated protein kinase kinase 5.
   
 0.874
Map2k2
Mitogen-activated protein kinase kinase 2.
   
 0.874
Mob1a
MOB kinase activator 1A.
    
 0.859
Stk38
Serine/threonine kinase 38.
    
 0.847
Stk38l
Serine/threonine kinase 38 like.
    
 0.847
Acta2
Actin alpha 2, smooth muscle.
    
 0.832
Acta1
Actin alpha 1, skeletal muscle.
    
 0.828
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.