STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Egr4Early growth response 4. (480 aa)    
Predicted Functional Partners:
Nab2
NGFI-A binding protein 2.
   
 0.757
Nab1
NGFI-A binding protein 1.
    
 0.729
Mapk7
Mitogen-activated protein kinase 7.
    
 0.632
Egr2
Early growth response 2.
   
 
0.627
Lamtor2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
   
  0.609
Sufu
SUFU negative regulator of hedgehog signaling.
   
 0.601
Arc
Activity regulated cytoskeleton associated protein.
   
 0.590
Gtf3c3
General transcription factor IIIC, polypeptide 3.
    
 0.584
Mrps11
Mitochondrial ribosomal protein S11.
    
  0.564
Atp1a4
Sodium/potassium-transporting ATPase subunit alpha-4.
    
 
 0.562
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.