STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MyocMyocilin. (490 aa)    
Predicted Functional Partners:
Lrguk
Leucine rich repeats and guanylate kinase domain containing.
    
 0.812
Grin1
Glutamate ionotropic receptor NMDA type subunit 1.
     
 0.729
Shisa6
Shisa family member 6.
    
  0.716
Mfap5
Microfibrillar associated protein 5.
   
  
 0.693
Olfm3
Olfactomedin 3.
    
 
0.657
Myl2
Myosin light chain 2.
    
   0.585
Tenm4
Teneurin transmembrane protein 4.
    
 
 0.579
Wdr36
WD repeat domain 36.
      
 0.574
Optn
Optineurin.
      
 0.569
Cyp1b1
Cytochrome P450 1B1.
      
 0.568
Your Current Organism:
Peromyscus maniculatus
NCBI taxonomy Id: 230844
Other names: P. maniculatus bairdii, Peromyscus maniculatus bairdii, prairie deer mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.